Lars Martin Jakt
Forsker
Fakultet for biovitenskap og akvakultur
2025
The potential of metagenomics and metatranscriptomics based on next generation sequencing for the taxonomic profiling of benthic communities 2025 - Amalia Aikaterini Mailli, Truls Borg Moum, Henning Reiss, Lars Martin Jakt
2024
Multiple losses of aKRAB from PRDM9 coincide with a teleost-specific intron size distribution 2024 BMC Biology - Ann-Christin Zinner, Lars Martin Jakt
2022
Intron size minimisation in teleosts 2022 BMC Genomics - Lars Martin Jakt, Arseny Dubin, Steinar Daae Johansen
Exploring the potential of mRNA for taxonomic delineation of marine benthic eukaryotes 2022 Marine Genomics - Amalia Aikaterini Mailli, Lars Martin Jakt, Henning Reiss, Martina Elisabeth Luise Kopp, Truls Borg Moum
2019
The mitochondrial transcriptome of the anglerfish Lophius piscatorius 2019 BMC Research Notes - Arseny Dubin, Tor Erik Jørgensen, Lars Martin Jakt, Steinar Daae Johansen
Exploration of an anglerfish genome 2019 - Arseny Dubin, Steinar Daae Johansen, Lars Martin Jakt
Profiling DNA methylation patterns of zebrafish liver associated with parental high dietary arachidonic acid. 2019 PLOS ONE - Anne-Catrin Adam, Kai Kristoffer Lie, Paul Whatmore, Lars Martin Jakt, Mari Moren, Kaja Helvik Skjærven
Complete loss of the MHC II pathway in an anglerfish, Lophius piscatorius 2019 Biology Letters - Arseny Dubin, Tor Erik Jørgensen, Truls Borg Moum, Steinar Daae Johansen, Lars Martin Jakt
2018
A mitochondrial long noncoding RNA in atlantic cod harbors complex heteroplasmic tandem repeat motifs 2018 Mitochondrial DNA. Part A, DNA Mapping, Sequencing, and Analysis - Tor Erik Jørgensen, Bård Ove Karlsen, Åse Emblem, Lars Martin Jakt, Jarle Tryti Nordeide, Truls Borg Moum, Steinar Daae Johansen
Mitochondrial genome variation of Atlantic cod 2018 BMC Research Notes - Tor Erik Jørgensen, Bård Ove Karlsen, Åse Emblem, Ragna Breines, morten Andreassen, Trine Ballestad Rounge, Alexander Johan Nederbragt, Kjetill Sigurd Jakobsen, Marianne Nymark, anita Ursvik, Dag H Coucheron, Lars Martin Jakt, Jarle Tryti Nordeide, Truls Borg Moum, Steinar Daae Johansen
Parental micronutrient deficiency distorts liver DNA methylation and expression of lipid genes associated with a fatty-liver-like phenotype in offspring 2018 Scientific Reports - Kaja Helvik Skjærven, Lars Martin Jakt, Jorge Manuel de Oliveira Fernandes, John Arne Dahl, Anne-Catrin Adam, Johanna Klughammer, Christoph Bock, Marit Espe
Early hematopoietic and vascular development in the chick 2018 International Journal of Developmental Biology - Hiroki Nagai, Masahiro Shin, Wei Weng, Fumie Nakazawa, Lars Martin Jakt, Cantas Alev, Guojun Sheng
2017
The Mitochondrial Genome of the European Anglerfish Lophius Piscatorius Express Low-Level Substitution Heteroplasmy 2017 Annals of Marine Biology and Research - Arseny Dubin, Tor Erik Jørgensen, Lars Martin Jakt, Truls Borg Moum, Steinar Daae Johansen
2016
Parental vitamin deficiency affects the embryonic gene expression of immune-, lipid transport-and apolipoprotein genes 2016 Scientific Reports - Kaja Helvik Skjærven, Lars Martin Jakt, John Arne Dahl, Marit Espe, Håvard Aanes, Kristin Hamre, Jorge Fernandes
2014
Longitudinal Analysis of DNA Methylation in CD34+ Hematopoietic Progenitors in Myelodysplastic Syndrome 2014 Stem Cells Translational Medicine - Yan-fung Wong, Chris N. Micklem, Masataka Taguchi, Hidehiro Itonaga, Yasushi Sawayama, Daisuke Imanishi, Shinichi Nishikawa, Yasushi Miyazaki, Lars Martin Jakt
2013
Epigenetic regulation of the neuroblastoma genes, Arid3b and Mycn 2013 Oncogene - K Kobayashi, Lars Martin Jakt, Shinichi Nishikawa
Prolonged Treatment with DNMT Inhibitors Induces Distinct Effects in Promoters and Gene-Bodies 2013 PLOS ONE - Yan-fung Wong, Lars Martin Jakt, Shinichi Nishikawa
A competitive protein interaction network buffers Oct4-mediated differentiation to promote pluripotency in embryonic stem cells 2013 Molecular Systems Biology - Silvia Munoz Descalzo, Pau Rue, Fernando Faunes, Penelope Hayward, Lars Martin Jakt, Tina Balayo, Jordi Garcia-Ojalvo, Alfonso Martinez Arias
A continuum of transcriptional identities visualized by combinatorial fluorescent in situ hybridization 2013 Development - Lars Martin Jakt, Satoko Moriwaki, Shinichi Nishikawa
DNA Methylation Restricts Lineage-specific Functions of Transcription Factor Gata4 during Embryonic Stem Cell Differentiation 2013 PLoS Genetics - Masaaki Oda, Yuichi Kumaki, Masaki Shigeta, Lars Martin Jakt, Chisa Matsuoka, Akiko Yamagiwa, Hitoshi Niwa, Masaki Okano
2012
Arhgef15 Promotes Retinal Angiogenesis by Mediating VEGF-Induced Cdc42 Activation and Potentiating RhoJ Inactivation in Endothelial Cells 2012 PLOS ONE - Sentaro Kusuhara, Yoko Fukushima, Shigetomo Fukuhara, Lars Martin Jakt, Mitsuhiro Okada, Yuri Shimizu, Masayuki Hata, Kohji Nishida, Akira Negi, Masanori Hirashima, Naoki Mochizuki, Shinichi Nishikawa, Akiyoshi Uemura
2011
Etv2/ER71 induces vascular mesoderm from Flk1+PDGFRα+ primitive mesoderm 2011 Blood - Hiroshi Kataoka, Misato Hayashi, Reiko Nakagawa, Yosuke Tanaka, Naoki Izumi, Satomi Nishikawa, Lars Martin Jakt, Hiroshi Tarui, Shinichi Nishikawa
Yolk sac endoderm is the major source of serum proteins and lipids and is involved in the regulation of vascular integrity in early chick development 2011 Developmental Dynamics - Fumie Nakazawa, Cantas Alev, Lars Martin Jakt, Guojun Sheng
Intrinsic transition of embryonic stem-cell differentiation into neural progenitors 2011 Nature - Daisuke Kamiya, Satoe Banno, Noriaki Sasai, Masatoshi Ohgushi, Hidehiko Inomata, Kiichi Watanabe, Masako Kawada, Rieko Yakura, Hiroshi Kiyonari, Kazuki Nakao, Lars Martin Jakt, Shinichi Nishikawa, Yoshiki Sasai
Identification of region-specific genes in the early chicken endoderm 2011 Gene Expression Patterns - Wataru Kimura, Cantas Alev, Guojun Sheng, Lars Martin Jakt, Sadao Yasugi, Kimiko Fukuda
2010
Secreted Frizzled Related Protein 4 Reduces Fibrosis Scar Size and Ameliorates Cardiac Function After Ischemic Injury 2010 Tissue Engineering Part A - Kentaro Matsushima, Takashi Suyama, Chiemi Takenaka, Naoki Nishishita, Keiko Ikeda, Yoshito Ikada, Yoshiki Sawa, Lars Martin Jakt, Hajime Mori, Shin Kawamata
Effective generation of iPS cells from CD34+ cord blood cells by inhibition of p53 2010 Experimental Hematology - Chiemi Takenaka, Naoki Nishishita, Nozomi Takada, Lars Martin Jakt, Shin Kawamata
Transcriptomic landscape of the primitive streak 2010 Development - Cantas Alev, Yuping Wu, Takeya Kasukawa, Lars Martin Jakt, Hiroki R. Ueda, Guojun Sheng
2009
The novel protein kinase Vlk is essential for stromal function of mesenchymal cells 2009 Development - Masaki Kinoshita, Takumi Era, Lars Martin Jakt, Shinichi Nishikawa
Necdin restricts proliferation of hematopoietic stem cells during hematopoietic regeneration 2009 Blood - Yasushi Kubota, Masatake Osawa, Lars Martin Jakt, Kazuaki Yoshikawa, Shiniche Nishikawa
PBRL, a putative peripheral benzodiazepine receptor, in primitive erythropoiesis 2009 Gene Expression Patterns - Fumie Nakazawa, Cantas Alev, Masahiro Shin, Yukiko Nakaya, Lars Martin Jakt, Guojun Sheng
2008
BetaA, the major beta globin in definitive red blood cells, is present from the onset of primitive erythropoiesis in chicken 2008 Developmental Dynamics - Cantas Alev, Brendan Mclntyre, Hiroki Nagai, Masahiro Shin, Kaori Shinmyozu, Lars Martin Jakt, Guojun Sheng
Expression profiling of circulating non-red blood cells in embryonic blood 2008 BMC Developmental Biology - Brendan Mclntyre, Cantas Alev, Hiroshi Tarui, Lars Martin Jakt, Guojun Sheng
DNA chip databases, omics, and gene fishing: Commentary 2008 Cancer Science - Lars Martin Jakt, Shinichi Nishikawa
2007
Isolation of cardiac cells from E8.5 yolk sac by ALCAM (CD166) expression 2007 Mechanisms of Development - Yoshinobu Murakami, Hirokazu Hirata, Yoshiaki Miyamoto, Ayako Nagahashi, Yoshiki Sawa, Lars Martin Jakt, Takayuki Asahara, Shin Kawamata
Array-based functional screening for genes that regulate vascular endothelial differentiation of Flk1-positive progenitors derived from embryonic stem cells 2007 Biochimica et Biophysica Acta - Fumio Yamauchi, Mitsuhiro Okada, Koichi Kato, Lars Martin Jakt, Hiroo Iwata
Embryonic stem-cell culture as a tool for developmental cell biology 2007 Nature reviews. Molecular cell biology - Shinichi Nishikawa, Lars Martin Jakt, Takumi Era
2006
In Vitro Modeling of Paraxial and Lateral Mesoderm Differentiation Reveals Early Reversibility 2006 Stem Cells - Hidetoshi Sakurai, Takumi Era, Lars Martin Jakt, Matsuhiro Okada, Shigeru Nakai, Satomi Nishikawa, Shinichi Nishikawa
Equivalency of Nuclear Transfer‐Derived Embryonic Stem Cells to Those Derived from Fertilized Mouse Blastocysts 2006 Stem Cells - Sayaka Wakayama, Lars Martin Jakt, Masako Suzuki, Ryoko Araki, Takufusa Hikichi, Satoshi Kishigami, Hiroshi Ohta, Nguyen Van Thuan, Eiji Mizutani, Yuko Sakaide, Sho Senda, Satoshi Tanaka, Mitsuhiro Okada, Masashi Miyake, Masumi Abe, Shinichi Nishikawa, Kunio Shiota, Teruhiko Wakayama
ARID3B Induces Malignant Transformation of Mouse Embryonic Fibroblasts and Is Strongly Associated with Malignant Neuroblastoma 2006 Cancer Research - Kenichiro Kobayashi, Takumi Era, Atsushi Takebe, Lars Martin Jakt, Shinichi Nishikawa
Microarray analysis of PDGFRα+ populations in ES cell differentiation culture identifies genes involved in differentiation of mesoderm and mesenchyme including ARID3b that is essential for development of embryonic mesenchymal cells 2006 Developmental Biology - Atsushi Takebe, Takumi Era, Mitsuhiro Okada, Lars Martin Jakt, Yoshikazu Kuroda, Shinichi Nishikawa
ALCAM (CD166) Is a Surface Marker for Early Murine Cardiomyocytes 2006 Cells Tissues Organs - Hirokazu Hirata, Yoshinobu Murakami, Yoshiaki Miyamoto, M. Tosaka, K. Inoue, A. Nagahashi, Lars Martin Jakt, T. Asahara, H. Iwata, Y. Sawa, Shin Kawamata
2005
Induction and monitoring of definitive and visceral endoderm differentiation of mouse ES cells 2005 Nature Biotechnology - Masahiro Yasunaga, Shinsuke Tada, Satomi Torikai-Nishikawa, Yoko Nakano, Mitsuhiro Okada, Lars Martin Jakt, Satomi Nishikawa, Tsutomu Chiba, Takumi Era, Shinichi Nishikawa
The transcriptional landscape of the mammalian genome 2005 Science - P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, R Oyama, T Ravasi, B Lenhard, C Wells, R Kodzius, K Shimokawa, VB Bajic, SE Brenner, S Batalov, AR Forrest, M Zavolan, MJ Davis, LG Wilming, V Aidinis, JE Allen, A Ambesi-Impiombato, R Apweiler, RN Aturaliya, TL Bailey, M Bansal, L Baxter, KW Beisel, T Bersano, H Bono, AM Chalk, KP Chiu, V Choudhary, A Christoffels, DR Clutterbuck, ML Crowe, E Dalla, BP Dalrymple, B de Bono, G Della Gatta, D di Bernardo, T Down, P Engstrom, M Fagiolini, G Faulkner, CF Fletcher, T Fukushima, M Furuno, S Futaki, M Gariboldi, P Georgii-Hemming, TR Gingeras, T Gojobori, RE Green, S Gustincich, M Harbers, Y Hayashi, TK Hensch, N Hirokawa, D Hill, L Huminiecki, M Iacono, K Ikeo, A Iwama, T Ishikawa, Lars Martin Jakt, A Kanapin, M Katoh, Y Kawasawa, J Kelso, H Kitamura, H Kitano, G Kollias, SP Krishnan, A Kruger, SK Kummerfeld, IV Kurochkin, LF Lareau, D Lazarevic, L Lipovich, J Liu, S Liuni, S McWilliam, M Madan Babu, M Madera, L Marchionni, H Matsuda, S Matsuzawa, H Miki, F Mignone, S Miyake, K Morris, S Mottagui-Tabar, N Mulder, N Nakano, H Nakauchi, P Ng, R Nilsson, S Nishiguchi, S Nishikawa, F Nori, O Ohara, Y Okazaki, V Orlando, KC Pang, WJ Pavan, G Pavesi, G Pesole, N Petrovsky, S Piazza, J Reed, JF Reid, BZ Ring, M Ringwald, B Rost, Y Ruan, SL Salzberg, A Sandelin, C Schneider, C Schonbach, K Sekiguchi, CA Semple, S Seno, L Sessa, Y Sheng, Y Shibata, H Shimada, K Shimada, D Silva, B Sinclair, S Sperling, E Stupka, K Sugiura, R Sultana, Y Takenaka, K Taki, K Tammoja, SL Tan, S Tang, MS Taylor, J Tegner, SA Teichmann, HR Ueda, E van Nimwegen, R Verardo, CL Wei, K Yagi, H Yamanishi, E Zabarovsky, S Zhu, A Zimmer, W Hide, C Bult, SM Grimmond, RD Teasdale, ET Liu, V Brusic, J Quackenbush, C Wahlestedt, JS Mattick, DA Hume, C Kai, D Sasaki, Y Tomaru, S Fukuda, M Kanamori-Katayama, M Suzuki, J Aoki, T Arakawa, J Iida, K Imamura, M Itoh, T Kato, H Kawaji, N Kawagashira, M Kojima, S Kondo, H Konno, K Nakano, N Ninomiya, T Nishio, M Okada, C Plessy, K Shibata, T Shiraki, S Suzuki, M Tagami, K Waki, A Watahiki, Y Okamura-Oho, H Suzuki, J Kawai, Y Hayashizaki, Consortium FANTOM
2003
In Vitro Differentiation of Mouse Embryonic Stem Cells: Hematopoietic and Vascular Cell Types 2003 Methods in Enzymology - Stuart T Fraser, Jun Yamashita, Lars Martin Jakt, Mitsuhiro Okada, Minetaro Ogawa, Satomi Nishikawa, Shinichi Nishikawa
An Open Source Client-Server System for the Analysis of Affymetrix Microarray Data 2003 Genome Informatics Series - Lars Martin Jakt, Mitsuhiro Okada, Shinichi Nishikawa
2002
Auto/Cross-Regulation of Hoxb3 Expression in Posterior Hindbrain and Spinal Cord 2002 Developmental Biology - Tai On Yau, Chung Tin Kwan, Lars Martin Jakt, Nicole Stallwood, Sabine Cordes, Mai Har Sham
2001
Assessing Clusters and Motifs from Gene Expression Data 2001 Genome Research - Lars Martin Jakt, Liang Cao, Kathryn S.E. Cheah, David K. Smith
2019
Investigating the community structure of eukaryotic benthic organisms by the extraction and analysis of limited mRNA 2019 The 8th International Barcode of Life Conference 2019 - Amalia Aikaterini Mailli, Lars Martin Jakt, Henning Reiss, Truls Borg Moum
2018
Epigenetic and transcriptional effects of optimizing 1-C nutrients in plant based feeds for Atlantic salmon 2018 5th International Symposium Genomics in Aquaculture (GIA 2018) - Kaja Helvik Skjærven, Jorge Manuel de Oliveira Fernandes, John Arne Dahl, Kristin Hamre, Lars Martin Jakt
Epigenetiske effekter av fiskefôr 2018 Havbrukskonferansen 2018 - Kaja Helvik Skjærven, Lars Martin Jakt, Marit Espe
Profiling DNA methylation patterns of zebrafish liver associated with parental high dietary arachidonic 2018 18th International Symposium on Fish Nutrition and Feeding - Anne-Catrin Adam, Kai Kristoffer Lie, Paul Whatmore, Lars Martin Jakt, Mari Moren, Kaja Helvik Skjærven
Nivået av arakidonsyre påvirker genuttrykket og DNA metylering i neste generasjon 2018 HAVBRUK Conference - Anne-Catrin Adam, Kai Kristoffer Lie, Paul Whatmore, Lars Martin Jakt, Mari Moren, Kaja Helvik Skjærven
2017
Genomics & Bioinformatics 2017 BI229F Bachelor level course - Lars Martin Jakt
Aquatic Genomics and Bioinformatics 2017 BI311F Master level course - Lars Martin Jakt
2016
Genomics & Bioinformatics 2016 BI229F Bachelor level course - Lars Martin Jakt
Aquatic Genomics and Bioinformatics 2016 BI311F Master level course - Lars Martin Jakt
High arachidonic acid level in the feed for zebrafish changes the metabolism and DNA methylation in both parents and offspring 2016 HAVBRUK Conference 2016 - Anne-Catrin Adam, Kai Kristoffer Lie, Lars Martin Jakt, Mari Moren, Kaja Helvik Skjærven
2015
Genomics & Bioinformatics 2015 BI229F Bachelor level course - Lars Martin Jakt
Extended multiplexed fluorescent in situ hybridization by combinatorial encoding of individual transcripts 2015 - Lars Martin Jakt, Satoko Moriwaki
Dietary high arachidonic acid level affects the DNA methylation pattern in zebrafish 2015 EPICONCEPT Epigenetics and Periconception Environment Cost Action FA1201 - Anne-Catrin Adam, Kai Kristoffer Lie, Lars Martin Jakt, Mari Moren, Kaja Helvik Skjærven
Changes in metabolic pathways and DNA methylation patterns in zebrafish fed high arachidonic acid levels 2015 12th Norwegian Fish Nutrition Seminar - Anne-Catrin Adam, Kai Kristoffer Lie, Lars Martin Jakt, Mari Moren, Kaja Helvik Skjærven
2014
2013
Counting transcripts to quantify relationships 2013 Departmental seminar - Lars Martin Jakt
Forcing ES differentiation 2013 BBSRC-JST UK-Japan Joint Program meeting - Lars Martin Jakt
2012
2011
2010
2009
Something about transcription 2009 Global COE program - Lars Martin Jakt
2008
2006
DNA microarray for stem cell research 2006 19th International Mouse Genome Conference - Lars Martin Jakt, Takumi Era, Shinichi Nishikawa
(mis)understanding stem cell differentiation 2006 Guest Lecture - Lars Martin Jakt
2003
An open source client-server system for the analysis of Affymetrix microarray data 2003 The Fourtheenth International Conference on Genome Informatics - Lars Martin Jakt, Mitsuhiro Okada, Shinichi Nishikawa